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Applying a grid technology to protein structure predictor "ROKKY"

Fujikawa, K.; Jin, W.; Park, S.-J.; Furuta, T.; Takada, S.; Arikawa, H.; Date, S.; Shimojo, S.

Studies in Health Technology and Informatics 112: 27-36

2005

ISSN/ISBN: 0926-9630
PMID: 15923713
Document Number: 590154
This paper describes a sub-project of BioGrid project called "HTC (High Throughput Computing) group." Generally, a protein structure prediction which requires large amount of computational resources is done by trial-and-error method. HTC group have been developing a high throughput computing system with a flexible workflow handling mechanism for a protein structure prediction. In this paper, we show how to apply our high throughput computing system to the protein structure predictor called "ROKKY."

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